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2081 An Effective Screening Algorithm and a Simple DNA Sequencing Protocol for Molecular Characterization of Rare Alpha-Globin Variants

Health Services and Outcomes Research – Non-Malignant Conditions
Program: Oral and Poster Abstracts
Session: 901. Health Services and Outcomes Research – Non-Malignant Conditions: Poster I
Saturday, December 5, 2015, 5:30 PM-7:30 PM
Hall A, Level 2 (Orange County Convention Center)

Noppacharn Uaprasert, MD1*, Rung Settapiboon2*, Supaporn Amornsiriwat1*, Pranee Sutcharitchan, MD3* and Ponlapat Rojnuckarin, MD, PhD4

1Medicine, Faculty of Medicine Chulalongkorn University, Bangkok, Thailand
2Department of Medicine, Faculty of Medicine Chulalongkorn University, Bangkok, Thailand
3Medicine, Chulalongkorn University and King Chulalongkorn Memorial Hospital, Bangkok, Thailand
4Dept. of Medicine, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand

Background: Hemoglobin (Hb) analysis sometimes yields unidentified Hb variants. However, there have been no validated phenotypic characteristics differentiating between a- and b-variants. Furthermore, amplification of α-globin genes are problematic due to almost identical α1-and α2-gene sequences.

Methods: Cases showing unidentified variants on isoelectric focusing (IEF) or high performance liquid chromatography (HPLC) during 2012-2013 were subjected to direct sequencing of α1-, α2- and b-globin genes. The appropriate cutoff Hb variant percentages were determined using receiver operator characteristic (ROC) analysis. The distinctive phenotypes of a-globin mutations were used to construct an algorithm which was subsequently validated in the other cohort of unknown variants.

Results: The characteristics that can differentiate between subjects with rare a-globin variants (N = 39) and b-variants (N = 24) were the presence of unknown variants of HbA2 (23.1% sensitivity and 100% specificity) and/or Hb variant levels of < 37% on IEF and < 31% on HPLC (100% sensitivity and 100% specificity). Applying these phenotypes (Figure 1) to another validation cohort (N = 67), a-globin variants could be correctly identified with 100% sensitivity and 97.1% specificity. Among the total of 72 subjects with rare a-globin variants, Hb Hekinan (69.4%) was the most common followed by Hb Q-Thailand (8.3%). Other mutations were very rare. This was the first report of Hb Lansing, Hb Owari, Hb G-Georgia, Hb Port Phillip, Hb I and Hb J-Singapore in Thai population. When iron deficiency anemia was excluded, these α-globin variants demonstrated normal or α+-thalassemia phenotypes. The percentages of Hb variants and their phenotypes were determined by the presence of mutations on either α1-globin or α2-globin gene and co-inherited α-globin gene deletions. Notably, some a-globin variants such as Hb Hekinan and Hb G-Georgia showed more severe phenotypes similar to thalassemia intermedia when they were co-inherited with other a- and/or β-globin gene mutations. We hereby reported the Hb Lansing mutation on the α1-globin gene coexisting with a+-thalassemia resulting in increased Hb Lansing percentage and hence falsely low oxygen saturation.

Conclusions: This is the largest series of rare α-globin mutations. An unknown Hb variant level is the most effective criteria to suggest α-globin variants. Our proposed simple algorithm and DNA sequencing protocol are effective for characterization of α-globin variants.

 

 Table 1 Hematological parameters and hemoglobin analysis data of rare α-globin variants in Thailand

Genotypes (N)

Mutation

Hb (g/dL)

MCV (fL)

HbX-IEF/HPLC (%)

HbXA2-IEF/HPLC (%)

Coexistence with other mutations

Hb Hekinan (39)

α1 27(B8) Glu>Asp

13.0+1.4

85.7 + 5.7

22.9±6.5/ ND

5.4±0.6 (4)/ND

 

Hb Hekinan (3)

α1 27(B8) Glu>Asp

11.8+1.2

68.7 + 3.5

34.8±3.6/ 24.5 ± 3.4

6.9±4.8/3 ± 2.7

SEA deletion

Hb Hekinan(6)

α1 27(B8) Glu>Asp

12.8+1.3

79.8 + 6.6

16.7±11.1/ 25.4 (1 case)

5.5±2.0/ 4.5 (1 case)

Heterozygous HbE

Hb Hekinan (1)

α1 27(B8) Glu>Asp

8.4

66.0

6.0/ ND

ND/ ND

Homozygous HbE

Hb Hekinan (1)

α1 27(B8) Glu>Asp

9.6

88.0

17.0 (Hekinan)/46.8 (Hope)

10.0 (Hekinan)/ 60.0 (Hope)

HbHope/HbE

Hb Q-Thailand (6)

α1 74(EF3) Asp>His

12.1+0.6

77.7 +2.9

35.0 ± 1.0/ 28.7 ±1.0

1.6 (1)/ND

 

Hb Owari (3)

α1 121(H4) Val>Met

11.3±0.6

89.7 +5.9

19.7 ± 6.8/ ND

ND/ND

 

Hb G-Georgia (1)

α2 95(G2) Pro>Leu

12.0

92.0

25.6/ ND

2.0/ND

 

Hb G-Georgia (1)

α2 95(G2) Pro>Leu

9.9

75.0

22.4/ ND

3.3/ND

Homozygous HbE

Hb G-Georgia (1)

α2 95(G2) Pro>Leu

7.5

67.0

4.4/ ND

1.2/ ND

Codon 17 A>T (Lys>Stop)

Hb Westmead (2)

α2 122(H5) His>Gln

11.8, 12.7(CB)

71.0, 117.0 (CB)

23.6, 4.7(CB)/ ND

ND/ ND

 

Hb Port Phillip (2)

α1 91(FG3) Leu>Pro

12.3, 10.6

84.0, 73.0

17.4/ 5.9, 21.3/10.7

1.7/ ND, ND/ND

 

Hb Lansing (1)

α1 87(F8) His>Gln

11.9

78.0

7.2/ 2.5

ND/ ND

 

Hb Lansing (1)

α1 87(F8) His>Gln

12.6

88.0

14.2/ 5.5

ND/ ND

-3.7 kb deletion

Hb I (1)

α2 16(A14) Lys>Glu

13.1

95.0

28.9/ 28.4

ND/ ND

 

Hb J-Singapore (1)

α2 79(EF8) Ala>Gly

15.9

94.0

30.0/ 25.1

ND/ ND

 

Hb J-Buda (1)

a1 61(E10) Lys>Asn

15.1

89.0

25.4/ 15.8

ND/ ND

 

Hb Phnom Penh (1)

α1 117(GH5)-Ile-α118(H1)

16.0

82.0

30.7/ ND

ND/ ND

 

Data were shown as mean + standard deviation when sample sizes were of ³ 3.

HbX-IEF/HPLC: unknown variant on IEF and HPLC, HbXA2-IEF/HPLC: unknown variant of HbA2 on IEF and HPLC, ND: not detected, SEA: Southeast Asia deletion

Disclosures: No relevant conflicts of interest to declare.

*signifies non-member of ASH